STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1745Osuccinylbenzoic acidCoA ligase EC 62126. (526 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 0.937
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.864
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
 
0.777
BF49_0640
AcylCoA dehydrogenase longchain specific mitochondrial precursor EC 139913.
 
 
  0.601
BF49_0641
ButyrylCoA dehydrogenase EC 13992.
 
 
  0.597
BF49_3222
AcylCoA dehydrogenase shortchain specific EC 13992.
 
 
  0.571
rplF
LSU ribosomal protein L6p L9e; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.551
BF49_1744
Hypothetical oxidoreductase.
  
  0.547
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
    
 
 0.546
BF49_1097
Branchedchain acylCoA dehydrogenase EC 139912.
  
 
  0.542
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.