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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1748FIG00440295 hypothetical protein. (125 aa)    
Predicted Functional Partners:
BF49_1749
FIG00442481 hypothetical protein.
 
     0.928
BF49_1750
EnoylCoA hydratase EC 42117.
 
 0.854
BF49_3310
FIG01004869 hypothetical protein.
  
     0.750
BF49_4154
FIG00440809 hypothetical protein.
 
     0.747
BF49_3228
Transcriptional regulator TetR family.
  
   
 0.744
BF49_0010
Hypothetical protein.
  
     0.736
BF49_7335
Bll0819 protein.
  
     0.736
BF49_1848
FIG00442018 hypothetical protein.
  
   
 0.722
BF49_0985
Fatty acid desaturase family protein.
  
   
 0.713
BF49_7227
HADsuperfamily hydrolase subfamily IA variant 3.
 
     0.703
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.