STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1752Lactoylglutathione lyase and related lyases. (126 aa)    
Predicted Functional Partners:
BF49_1634
MethylmalonylCoA mutase EC 54992.
    
 0.607
BF49_1637
MethylmalonylCoA mutase EC 54992.
    
 0.607
BF49_1751
Bll2942 probable reductase EC 111.
  
  0.601
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
  
  
 0.562
nuoI
NADHubiquinone oxidoreductase chain I EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.555
nuoD
NADHubiquinone oxidoreductase chain D EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
  
 0.541
BF49_0340
Succinate dehydrogenase cytochrome b556 subunit.
   
  
 0.540
BF49_2830
Biotin carboxylase EC 63414.
  
 
 0.532
BF49_6971
Hypothetical protein.
  
 0.485
BF49_1753
ButyrylCoA dehydrogenase EC 13992.
  
 
 0.480
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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