Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1772Betaureidopropionase EC 3516. (416 aa)    
Predicted Functional Partners:
BF49_3142
Dihydropyrimidinase EC 3522.
 
 
 0.986
BF49_1337
Dhydantoinase EC 3522.
 
 
 0.983
BF49_1412
Dhydantoinase EC 3522.
 
 
 0.983
panC
Pantoatebetaalanine ligase EC 6321; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.925
BF49_2707
Omegaamino acidpyruvate aminotransferase EC 26118; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.924
BF49_5328
Acetylornithine deacetylaseSuccinyldiaminopimelate desuccinylase and related deacylases.
  
  
 
0.923
BF49_1272
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.902
BF49_1867
Aldehyde dehydrogenase EC 1213.
    
 0.902
BF49_3132
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.902
BF49_5466
Uricase urate oxidase EC 1733.
 
  
 0.814
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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