Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1781Transcriptional regulators. (290 aa)    
Predicted Functional Partners:
BF49_1782
Adenosylmethionine8amino7oxononanoate aminotransferase EC 26162; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.866
BF49_1783
Glutamate Aspartate periplasmic binding protein precursor GltI TC 3A134.
       0.755
BF49_1784
AspGlu racemase.
 
     0.735
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.602
BF49_1779
Glutamate Aspartate transport system permease protein GltK TC 3A134.
  
    0.567
BF49_1780
Glutamate Aspartate transport system permease protein GltJ TC 3A134.
       0.557
BF49_2839
FIG00442497 hypothetical protein.
 
   
 0.536
BF49_6014
Predicted transcriptional regulator of the myoinositol catabolic operon.
 
   
 0.530
glmM
Phosphoglucosamine mutase EC 54210; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.459
BF49_3501
Phosphoglucosamine mutase EC 54210 Phosphomannomutase EC 5428.
  
 
 0.459
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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