Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1786Bsl2907 protein. (69 aa)    
Predicted Functional Partners:
BF49_1787
Putative cytochrome P450 hydroxylase.
 
  
 0.748
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
    
 0.625
BF49_0636
Bll0142 protein.
  
   
 0.604
BF49_6651
NADHubiquinone oxidoreductase chain M EC 1653.
     
 0.549
BF49_7289
FIG00441112 hypothetical protein.
  
   
 0.537
BF49_1785
Transcriptional regulator TetR family.
       0.531
BF49_1788
Alphaketoglutarate permease.
     
 0.529
BF49_6648
NADHubiquinone oxidoreductase chain J EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
     
  0.528
nuoN
NADHubiquinone oxidoreductase chain N EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
     
  0.528
BF49_1789
Bll2903 hypothetical protein.
       0.527
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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