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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1786Bsl2907 protein. (69 aa)    
Predicted Functional Partners:
BF49_1787
Putative cytochrome P450 hydroxylase.
 
  
 0.749
BF49_0636
Bll0142 protein.
  
   
 0.615
BF49_1785
Transcriptional regulator TetR family.
     
 0.534
BF49_1788
Alphaketoglutarate permease.
     
 0.530
BF49_1789
Bll2903 hypothetical protein.
       0.525
BF49_7289
FIG00441112 hypothetical protein.
  
   
 0.518
BF49_6580
Hypothetical protein COG2043.
  
     0.505
BF49_0011
FIG00443355 hypothetical protein.
  
     0.496
BF49_7336
FIG00443355 hypothetical protein.
  
     0.496
BF49_7184
FIG00445077 hypothetical protein.
  
   
 0.481
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.