Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1795Phenylacetatecoenzyme A ligase EC 62130; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (443 aa)    
Predicted Functional Partners:
BF49_1798
PhenylacetateCoA oxygenase PaaJ subunit.
 
  
 0.998
BF49_1799
PhenylacetateCoA oxygenase PaaI subunit.
 
 
 0.998
BF49_1800
PhenylacetateCoA oxygenase PaaH subunit.
 
 
 0.998
BF49_1801
PhenylacetateCoA oxygenase PaaG subunit.
 
 
 0.998
BF49_1797
PhenylacetateCoA oxygenasereductase PaaK subunit.
 
 
 0.997
BF49_1796
Phenylacetic acid degradation protein PaaD thioesterase.
 
 
 0.996
BF49_0581
Amidase clustered with urea ABC transporter and nitrile hydratase functions; Belongs to the amidase family.
    
  0.903
BF49_3937
Amidase; AspartyltRNAAsn amidotransferase subunit A EC 6356 GlutamyltRNAGln amidotransferase subunit A EC 6357.
    
  0.903
BF49_0537
Amidase family protein bll0246; Belongs to the amidase family.
    
  0.902
BF49_1169
Amidase; AspartyltRNAAsn amidotransferase subunit A EC 6356 GlutamyltRNAGln amidotransferase subunit A EC 6357; Belongs to the amidase family.
    
  0.902
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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