STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1797PhenylacetateCoA oxygenasereductase PaaK subunit. (360 aa)    
Predicted Functional Partners:
BF49_1798
PhenylacetateCoA oxygenase PaaJ subunit.
 
 
 0.999
BF49_1799
PhenylacetateCoA oxygenase PaaI subunit.
 
 0.999
BF49_1800
PhenylacetateCoA oxygenase PaaH subunit.
 
 
 0.999
BF49_1801
PhenylacetateCoA oxygenase PaaG subunit.
 
 0.999
BF49_1795
Phenylacetatecoenzyme A ligase EC 62130; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.997
BF49_1796
Phenylacetic acid degradation protein PaaD thioesterase.
 
 
  0.990
BF49_1750
EnoylCoA hydratase EC 42117.
 
 
  0.945
BF49_0635
EnoylCoA hydratase EC 42117; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.937
BF49_1802
Phenylacetic acid degradation operon negative regulatory protein PaaX.
 
   
 0.857
BF49_2793
Proline dehydrogenase EC 15998 Proline oxidase Delta1pyrroline5carboxylate dehydrogenase EC 15112; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.599
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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