Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1809Betaketoadipate enollactone hydrolase EC 31124. (304 aa)    
Predicted Functional Partners:
BF49_6971
Hypothetical protein.
  
 0.821
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.673
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.656
BF49_1808
FIG00444077 hypothetical protein.
   
 0.641
BF49_1806
Hypothetical protein.
 
  
  0.619
BF49_5704
Monooxygenase flavinbinding family.
 0.617
BF49_7225
Monooxygenase flavinbinding family.
 0.600
BF49_6759
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.590
BF49_1807
Polyhydroxyalkanoic acid synthase.
    
 0.570
BF49_1814
Hypothetical protein.
  
     0.566
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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