Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1824FIG00440226 hypothetical protein. (236 aa)    
Predicted Functional Partners:
BF49_1823
Gammaglutamyltranspeptidase EC 2322.
 
     0.818
BF49_1825
Oligopeptide transport system permease protein OppB TC 3A151; Belongs to the ABC transporter superfamily.
       0.785
BF49_1826
Putative glutathione transporter ATPbinding component; Belongs to the ABC transporter superfamily.
       0.785
BF49_1827
Putative glutathione transportersolutebinding component.
 
     0.764
BF49_1828
Putative glutathione transporter permease component.
 
     0.619
BF49_1821
Oligopeptide transport system permease protein OppB TC 3A151; Belongs to the ABC transporter superfamily.
       0.552
BF49_1822
Putative glutathione transporter ATPbinding component; Belongs to the ABC transporter superfamily.
       0.552
BF49_1820
Putative glutathione transporter permease component.
       0.475
BF49_1819
Putative glutathione transporter permease component.
       0.465
BF49_1829
Putative glutathione transporter permease component.
       0.427
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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