Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1841Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism. (401 aa)    
Predicted Functional Partners:
BF49_1840
Sugar phosphate isomerasesepimerase.
 
   
 0.957
BF49_1842
GLUCOSEFRUCTOSE OXIDOREDUCTASE EC 119928.
 
   
 0.891
BF49_1843
Hypothetical protein.
 
  
 0.815
BF49_1847
Transcriptional regulator TetR family.
 
     0.656
dapB
4hydroxytetrahydrodipicolinate reductase EC 11718; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
 0.640
asd
Aspartatesemialdehyde dehydrogenase EC 12111; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.606
asd-2
Aspartatesemialdehyde dehydrogenase EC 12111; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.606
BF49_1377
Dehydrogenase.
 
   
 0.603
BF49_3260
Chorismate mutase I EC 54995.
  
  
 0.591
BF49_6030
Usg protein.
  
  
  0.590
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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