STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1848FIG00442018 hypothetical protein. (282 aa)    
Predicted Functional Partners:
BF49_1748
FIG00440295 hypothetical protein.
  
     0.722
BF49_0636
Bll0142 protein.
  
     0.673
BF49_3310
FIG01004869 hypothetical protein.
 
    0.665
BF49_3479
FIG00440260 hypothetical protein.
  
     0.617
BF49_4240
FIG01004290 hypothetical protein.
  
     0.612
BF49_3904
Blr0101 hypothetical protein.
  
   
 0.594
BF49_4154
FIG00440809 hypothetical protein.
  
    0.593
BF49_6569
Shortchain dehydrogenasereductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  0.592
BF49_5848
FIG00439847 hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
     0.580
BF49_4948
Gluconolactonase protein family.
  
    0.579
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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