Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1884Flavin reductase EC 15130. (224 aa)    
Predicted Functional Partners:
BF49_1885
Oxidoreductase.
 
    0.744
BF49_1810
Possible membrane protein.
  
    0.580
BF49_5808
Rrf2linked NADHflavin reductase.
  
     0.461
BF49_1886
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.458
BF49_2080
FIG00443075 hypothetical protein.
 
 
  0.453
BF49_1873
InterPro IPR001395 COGs COG0656.
 
  
 0.433
BF49_4794
Flagellar basalbody rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.407
BF49_5827
Flagellar basalbody rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.407
BF49_3019
Riboflavin kinase EC 27126 FMN adenylyltransferase EC 2772; Belongs to the ribF family.
     
  0.405
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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