STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1886Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
BF49_1885
Oxidoreductase.
 
     0.868
BF49_1275
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.694
BF49_1910
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.634
BF49_1458
Miscellaneous not classified regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.626
BF49_2957
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.609
BF49_1898
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.574
BF49_0933
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.558
BF49_3987
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.543
BF49_4862
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.511
BF49_3162
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.505
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.