Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_1894Phytochrome twocomponent sensor histidine kinase EC 273. (485 aa)    
Predicted Functional Partners:
BF49_3218
DNAdirected RNA polymerase specialized sigma subunit sigma24like.
 
   
 0.786
BF49_0312
Twocomponent response regulator.
 
   
 0.775
BF49_6942
Twocomponent response regulator.
 
   
 0.773
BF49_6379
Phytochrome twocomponent sensor histidine kinase EC 273.
  
   
 0.766
BF49_6796
Twocomponent response regulator.
 
   
 0.759
BF49_1895
Mandelate racemasemuconate lactonizing enzyme family protein.
       0.749
BF49_4524
FIG01006195 hypothetical protein.
  
   
 0.591
BF49_3740
Sensor protein.
 
   
 0.572
BF49_4679
Response regulator.
  
     0.568
BF49_5318
Sensory transduction histidine kinase.
  
     0.544
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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