STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1895Mandelate racemasemuconate lactonizing enzyme family protein. (378 aa)    
Predicted Functional Partners:
BF49_5764
5dehydro4deoxyglucarate dehydratase EC 42141; Belongs to the DapA family.
 
  
 0.948
BF49_5761
Dgalactarate dehydratase EC 42142.
 
 
 0.939
BF49_5763
Glucarate dehydratase EC 42140.
  
  
0.921
BF49_1894
Phytochrome twocomponent sensor histidine kinase EC 273.
       0.751
BF49_2826
2dehydro3deoxygalactonokinase EC 27158.
 
 
 0.626
BF49_5943
Putative 24dihydroxyhept2ene17dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.541
BF49_1719
24dihydroxyhept2ene17dioic acid aldolase EC 412n4; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.527
BF49_4837
Dmannonate oxidoreductase EC 11157.
 
  
 0.500
BF49_1718
Altronate dehydratase EC 4217.
 
  
 0.495
BF49_3903
Lfuconolactone hydrolase.
 
  
 0.476
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.