STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1896Cytochrome ctype biogenesis protein CcdA DsbD analog. (243 aa)    
Predicted Functional Partners:
ccmC
Cytochrome ctype biogenesis protein CcmC putative heme lyase for CcmE; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.712
BF49_3831
Putative integral membrane protein.
  
    0.690
BF49_3282
Thioldisulfide oxidoreductase TlpA.
 
  
 0.516
BF49_0386
Cytochrome ctype biogenesis protein CcmGDsbE thioldisulfide oxidoreductase.
 
  
 0.501
BF49_6437
Glycerophosphoryl diester phosphodiesterase EC 31446.
  
     0.484
BF49_1897
Hypothetical protein.
       0.447
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.