Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1932Transcriptional regulator CrpFnr family. (232 aa)    
Predicted Functional Partners:
BF49_6459
Transcriptional regulator CrpFnr family.
  
  
 
0.903
BF49_3553
Transcriptional regulator CrpFnr family.
  
  
 
0.902
BF49_1929
Twocomponent oxygensensor histidine kinase FixL.
 
 
 
 0.746
BF49_5028
Transcriptional regulator CrpFnr family.
  
     0.695
BF49_5835
Transcriptional regulator CrpFnr family.
  
     0.694
BF49_6759
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 
 0.683
BF49_3171
Glutamate synthase NADPH large chain EC 14113.
    
 0.649
BF49_1165
Adenylate cyclase EC 4611.
  
 0.635
BF49_3165
Adenylate cyclase EC 4611.
  
 0.635
BF49_1492
Transcriptional regulator CrpFnr family.
  
     0.634
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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