STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1935Glycogen debranching enzyme. (734 aa)    
Predicted Functional Partners:
BF49_3961
Glycogen phosphorylase EC 2411; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.964
BF49_1937
Glycosyl transferase group 1.
 
 0.921
BF49_2643
Glycosyltransferase.
 
 0.889
BF49_3878
Glycosyltransferase.
 
 0.889
BF49_4543
Glycosyltransferase.
 
 0.889
BF49_4659
Glycosyltransferase.
 
 0.889
BF49_4617
14alphaglucan branching enzyme EC 24118.
  
 
 0.867
BF49_4764
Maltooligosyltrehalose trehalohydrolase EC 321141.
  
 
 0.867
BF49_4881
Maltooligosyltrehalose trehalohydrolase EC 321141.
  
 
 0.867
glgB
14alphaglucan glycogen branching enzyme GH13type EC 24118; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.867
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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