STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1938Alkyl sulfatase EC 316. (644 aa)    
Predicted Functional Partners:
BF49_1939
Diguanylate cyclasephosphodiesterase GGDEF EAL domains with PASPAC sensors.
       0.585
BF49_3994
FIG00445140 hypothetical protein.
  
     0.519
BF49_2409
Putative exported protein.
 
     0.511
BF49_2488
General secretion pathway protein A.
   
    0.458
BF49_6750
Possible NADH oxidoreductase.
  
     0.442
BF49_1756
COGs COG0183.
  
    0.438
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.