STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1949Hypothetical with similarity to BchE but NOT Mgprotoporphyrin monomethyl ester cyclase anaerobic. (198 aa)    
Predicted Functional Partners:
BF49_1950
Hypothetical methyltransferase.
     0.993
BF49_1870
UDPgalactoselipid carrier transferase EC 2.
   
    0.547
BF49_3566
UDPgalactoselipid carrier transferase EC 2.
   
    0.547
BF49_5193
FIG00440701 hypothetical protein.
   
    0.547
BF49_3105
Putative Omethyl transferase.
 
 
 0.521
BF49_1951
Isoquinoline 1oxidoreductase alpha subunit EC 139916.
       0.470
hemE
Uroporphyrinogen III decarboxylase EC 41137; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
     
 0.465
BF49_1952
Isoquinoline 1oxidoreductase beta subunit EC 139916.
       0.459
BF49_1954
Sulfur oxidation protein SoxX.
 
    0.451
BF49_6483
Abortive infection protein.
 
    0.405
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.