Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_1968Glucosemethanolcholine GMC oxidoreductaseNAD binding site. (528 aa)    
Predicted Functional Partners:
BF49_6291
Putative diheme cytochrome c553.
 
 0.684
BF49_4189
Hypothetical protein.
    
 0.678
BF49_5738
Putative diheme cytochrome c553.
 
 0.650
BF49_4307
Putative diheme cytochrome c553.
  
 0.636
BF49_3783
Putative diheme cytochrome c553.
  
 0.592
BF49_4747
Gluconolactonase EC 31117.
 
 
 0.592
BF49_7028
Putative diheme cytochrome c553.
  
 0.592
BF49_1280
Similar to flavohemoprotein.
 
  
 0.569
BF49_1373
Gluconolactonase EC 31117 Isochorismatase EC 3321.
 
 
 0.550
BF49_1638
Bll3052 protein.
    
  0.514
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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