STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
BF49_1971Cytochrome O ubiquinol oxidase subunit III EC 1103. (213 aa)    
Predicted Functional Partners:
BF49_1970
Cytochrome O ubiquinol oxidase subunit IV EC 1103.
 
 0.999
BF49_1973
Cytochrome O ubiquinol oxidase subunit II EC 1103.
 
 0.999
BF49_1972
Cytochrome O ubiquinol oxidase subunit I EC 1103; Belongs to the heme-copper respiratory oxidase family.
 
 0.994
BF49_0629
Cytochrome O ubiquinol oxidase subunit II EC 1103.
 
 0.990
BF49_2306
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.988
nuoA
NADH ubiquinone oxidoreductase chain A EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
 0.987
nuoH
NADHubiquinone oxidoreductase chain H EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 0.986
BF49_6651
NADHubiquinone oxidoreductase chain M EC 1653.
   
 0.986
BF49_5274
Cytochrome c oxidase polypeptide II EC 1931.
 
 0.985
BF49_0626
Cytochrome O ubiquinol oxidase subunit IV EC 1103.
 
 0.981
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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