STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_1979FIG137887 membrane protein related to purine degradation. (396 aa)    
Predicted Functional Partners:
BF49_5467
2oxo4hydroxy4carboxy5ureidoimidazoline OHCU decarboxylase 5Hydroxyisourate Hydrolase HIUase EC 35217.
 
  
 0.904
BF49_1346
5Hydroxyisourate Hydrolase HIUase EC 35217.
 
  
 0.854
BF49_5466
Uricase urate oxidase EC 1733.
 
    0.804
BF49_0717
Cysteine desulfurase EC 2817 SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
     
  0.690
BF49_0721
Cysteine desulfurase EC 2817.
     
  0.690
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
     
  0.660
BF49_5470
Guanine deaminase EC 3543 Hydroxydechloroatrazine ethylaminohydrolase EC 35993.
 
     0.590
BF49_1978
Hypothetical protein.
       0.584
BF49_3787
Cytochrome c2.
 
  
  0.544
BF49_4592
Cytochrome c.
 
  
  0.531
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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