STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1979FIG137887 membrane protein related to purine degradation. (396 aa)    
Predicted Functional Partners:
BF49_5467
2oxo4hydroxy4carboxy5ureidoimidazoline OHCU decarboxylase 5Hydroxyisourate Hydrolase HIUase EC 35217.
 
  
 0.871
BF49_1346
5Hydroxyisourate Hydrolase HIUase EC 35217.
 
  
 0.834
BF49_5466
Uricase urate oxidase EC 1733.
 
    0.798
BF49_5470
Guanine deaminase EC 3543 Hydroxydechloroatrazine ethylaminohydrolase EC 35993.
 
     0.585
BF49_1978
Hypothetical protein.
       0.584
BF49_5471
Nucleoside ABC transporter periplasmic nucleosidebinding protein.
 
     0.502
BF49_3787
Cytochrome c2.
 
  
  0.489
BF49_1980
Hypothetical protein.
       0.486
BF49_5012
Cytochrome c2.
 
  
  0.476
BF49_4592
Cytochrome c.
 
  
  0.474
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.