STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_1995Xylose ABC transporter periplasmic xylosebinding protein XylF. (315 aa)    
Predicted Functional Partners:
BF49_1997
Dxylose transport ATPbinding protein XylG.
 
 0.960
BF49_2019
Xylose ABC transporter periplasmic xylosebinding protein XylF.
  
  
  0.954
BF49_1996
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.929
BF49_1398
ABC transporter sugarbinding protein.
  
  
 
0.927
BF49_3901
ABC transporter sugarbinding protein.
  
  
 
0.927
BF49_6677
ABC transporter substratebinding protein.
  
  
 
0.924
BF49_1317
Ribose ABC transporter periplasmic ribosebinding protein RbsB TC 3A121.
  
  
  0.920
BF49_1322
Ribose ABC transport system permease protein RbsC TC 3A121; Belongs to the binding-protein-dependent transport system permease family.
 
 0.898
BF49_3900
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.897
BF49_1323
Ribosexylosearabinosegalactoside ABCtype transport systems permease component 1.
 
 0.896
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (26%) [HD]