STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2003Protein of unknown function DUF900 hydrolase family protein. (338 aa)    
Predicted Functional Partners:
BF49_2004
Mandelate racemasemuconate lactonizing enzyme family protein.
       0.705
BF49_0113
FIG00442128 hypothetical protein.
  
     0.702
BF49_6827
Putative outermembrane immunogenic protein precursor.
  
     0.601
BF49_6335
Putative outermembrane immunogenic protein precursor.
  
     0.595
BF49_0704
InterPro IPR000498.
  
     0.580
BF49_4799
FIG00450025 hypothetical protein.
  
     0.566
BF49_3131
Blr4701 putative outermembrane immunogenic protein precursor.
  
     0.557
BF49_4826
Flagellar protein FlgJ peptidoglycan hydrolase EC 321.
  
     0.542
BF49_1707
HDED PROTEIN.
  
     0.541
BF49_3006
Surface antigen.
  
     0.539
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.