Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_2011Mandelate racemasemuconate lactonizing enzyme family protein. (196 aa)    
Predicted Functional Partners:
BF49_3903
Lfuconolactone hydrolase.
 
  
 0.621
BF49_2010
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
       0.545
BF49_2826
2dehydro3deoxygalactonokinase EC 27158.
 
 
 0.532
BF49_1371
FIG00439895 hypothetical protein.
 
  
 0.524
BF49_1718
Altronate dehydratase EC 4217.
 
  
 0.500
BF49_4837
Dmannonate oxidoreductase EC 11157.
 
 
 0.481
BF49_4747
Gluconolactonase EC 31117.
 
  
 0.478
BF49_2272
Radical SAM domain protein.
     
  0.464
BF49_2825
2dehydro3deoxyphosphogalactonate aldolase EC 41221.
 
   
 0.449
BF49_1133
2dehydro3deoxygluconate kinase EC 27145.
 
  
 0.445
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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