STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2019Xylose ABC transporter periplasmic xylosebinding protein XylF. (321 aa)    
Predicted Functional Partners:
BF49_6677
ABC transporter substratebinding protein.
  
  
  0.974
BF49_1398
ABC transporter sugarbinding protein.
  
  
  0.966
BF49_1317
Ribose ABC transporter periplasmic ribosebinding protein RbsB TC 3A121.
  
  
  0.959
BF49_2017
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.955
BF49_1995
Xylose ABC transporter periplasmic xylosebinding protein XylF.
  
  
  0.954
BF49_2018
Dxylose transport ATPbinding protein XylG.
 
 0.945
BF49_3901
ABC transporter sugarbinding protein.
  
  
 
0.926
BF49_2010
Xylose ABC transporter permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.893
BF49_6675
Ribose ABC transport system permease protein RbsC TC 3A121; Belongs to the binding-protein-dependent transport system permease family.
 
 0.887
BF49_1315
Ribose ABC transport system permease protein RbsC TC 3A121; Belongs to the binding-protein-dependent transport system permease family.
 
 0.883
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.