Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2041NaH antiporter NhaP. (416 aa)    
Predicted Functional Partners:
BF49_1579
Cation transport ATPase.
   
 0.700
BF49_4465
Mg2 transport ATPase Ptype EC 3632.
   
 0.700
atpE
ATP synthase F0 sector subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.598
BF49_2481
Eight transmembrane protein EpsH.
   
 
 0.569
BF49_2066
FIG01008276 hypothetical protein.
 
     0.564
BF49_2113
Glutathioneregulated potassiumefflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.528
BF49_0605
Hypothetical protein.
    
 
 0.522
BF49_5969
Bll5679 protein.
    
 0.451
BF49_4928
FIG00801946 hypothetical protein.
   
 
 0.449
BF49_6381
Chemotaxis protein methyltransferase CheR EC 21180.
    
 0.441
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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