Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2047Formate dehydrogenase chain D EC 1212; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family. (213 aa)    
Predicted Functional Partners:
BF49_2048
Putative formate dehydrogenase oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.882
BF49_1550
NADdependent formate dehydrogenase alpha subunit.
 
 
 
 0.828
BF49_1552
NADdependent formate dehydrogenase delta subunit.
 
   
 0.743
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.709
mobA
Molybdopteringuanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
 
 0.696
BF49_0721
Cysteine desulfurase EC 2817.
  
 0.659
BF49_2050
Molybdopterin oxidoreductase ironsulfur binding subunit EC 127.
  
 
 0.621
napA
Periplasmic nitrate reductase precursor EC 17994; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.594
BF49_1547
Hydrogen peroxideinducible genes activator; Belongs to the LysR transcriptional regulatory family.
 
     0.582
BF49_1549
NADdependent formate dehydrogenase beta subunit.
 
  
 0.580
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: medium (44%) [HD]