Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2070Blr1018 hypothetical protein. (413 aa)    
Predicted Functional Partners:
BF49_0730
Major facilitator superfamily.
  
    0.835
BF49_1049
Oxalateformate antiporter.
  
     0.748
BF49_5122
Permeases of the major facilitator superfamily.
  
   
0.539
BF49_1104
MFS permease.
  
   
0.537
BF49_6451
Putative membrane protein.
  
     0.506
BF49_2072
5nucleotidase EC 3135; Belongs to the 5'-nucleotidase family.
 
     0.460
BF49_2071
EnoylCoA hydratase EC 42117.
       0.443
BF49_0641
ButyrylCoA dehydrogenase EC 13992.
  
     0.400
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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