STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2105ErfKYbiSYcfSYnhG. (227 aa)    
Predicted Functional Partners:
BF49_4398
Protein of unknown function DUF882.
 
     0.502
BF49_3343
DalanylDalanine carboxypeptidase EC 34164; Belongs to the peptidase S11 family.
 
  
 0.494
BF49_6412
DalanylDalanine carboxypeptidase EC 34164; Belongs to the peptidase S11 family.
    
 0.462
BF49_0588
Probable exported protein STY0357.
 
  
 0.456
BF49_1585
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
  
  
 0.443
BF49_3931
Murein endopeptidase.
  
     0.436
BF49_3003
Ribonuclease; Belongs to the RNase T2 family.
  
     0.431
BF49_6987
DalanylDalanine carboxypeptidase EC 34164; Belongs to the peptidase S11 family.
    
 0.431
BF49_0103
FIG00418427 hypothetical protein.
  
     0.422
BF49_2783
Protein of unknown function DUF463 YcjXlike protein.
  
     0.422
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.