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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2115Valinepyruvate aminotransferase EC 26166. (409 aa)    
Predicted Functional Partners:
BF49_2114
Bll2613 protein.
       0.583
BF49_0689
Homoserine dehydrogenase EC 1113.
 
 
 0.534
BF49_0563
Aspartokinase EC 2724; Belongs to the aspartokinase family.
   
 
 0.518
BF49_0550
Branchedchain amino acid aminotransferase EC 26142.
  
 0.502
BF49_2993
Branchedchain amino acid aminotransferase EC 26142.
  
 0.502
BF49_5647
Asparagine synthetase glutaminehydrolyzing EC 6354.
  
 
 0.495
BF49_0998
Alanine racemase EC 5111; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.486
BF49_3262
Cyclohexadienyl dehydrogenase EC 13112EC 13143.
    
 0.458
BF49_1416
Aminotransferase class III.
 
  
 0.456
ppc
Phosphoenolpyruvate carboxylase EC 41131; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.
    
  0.456
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.