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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2157Ribulosephosphate 3epimerase EC 5131; Belongs to the ribulose-phosphate 3-epimerase family. (245 aa)    
Predicted Functional Partners:
BF49_2162
Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 0.995
BF49_4302
Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 0.992
BF49_6203
Transketolase Nterminal section EC 2211.
  
 0.992
BF49_2163
Phosphoribulokinase EC 27119.
  
 
 0.989
BF49_4893
6phosphogluconate dehydrogenase decarboxylating EC 11144.
    
 0.973
BF49_6202
Transketolase Cterminal section EC 2211.
 
 
 0.970
rpiA
Ribose 5phosphate isomerase A EC 5316; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
 0.967
BF49_2274
Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.
    
 0.951
xylB
Xylulose kinase EC 27117.
 
  
 0.921
xylB-2
Xylulose kinase EC 27117.
 
  
 0.921
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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