STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2163Phosphoribulokinase EC 27119. (291 aa)    
Predicted Functional Partners:
BF49_2159
Ribulose bisphosphate carboxylase small chain EC 41139.
 
 
 0.999
cbbL
Ribulose bisphosphate carboxylase large chain EC 41139; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 
 0.998
BF49_5968
Ribulosephosphate 3epimerase EC 5131; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.994
rpiA
Ribose 5phosphate isomerase A EC 5316; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.990
BF49_2157
Ribulosephosphate 3epimerase EC 5131; Belongs to the ribulose-phosphate 3-epimerase family.
  
 
 0.989
fbp
Fructose16bisphosphatase type I EC 31311; Belongs to the FBPase class 1 family.
 
  
 0.902
BF49_2165
RuBisCO operon transcriptional regulator CbbR; Belongs to the LysR transcriptional regulatory family.
 
   
 0.878
BF49_2161
Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
 
  
 0.846
BF49_2162
Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.839
BF49_2158
Probable RuBisCoexpression protein CbbX.
 
  
 0.813
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.