fbp protein (Bradyrhizobium sp.) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

fbp

Fructose16bisphosphatase type I EC 31311; Belongs to the FBPase class 1 family. (345 aa)

Predicted Functional Partners:

BF49_2161

0.998

BF49_2162

0.998

BF49_4302

0.996

tal

0.996

BF49_4299

0.995

BF49_4298

0.994

BF49_6203

0.971

BF49_2274

0.948

BF49_2432

0.948

BF49_5727

0.948

Your Current Organism:

Bradyrhizobium sp.

NCBI taxonomy Id: 376
Other names: B. sp.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BF49_2161	BF49_2162	BF49_2161	BF49_2162	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	0.991
BF49_2161	BF49_2274	BF49_2161	BF49_2274	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.	0.913
BF49_2161	BF49_4298	BF49_2161	BF49_4298	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Fructosebisphosphate aldolase class I EC 41213.	0.934
BF49_2161	BF49_4299	BF49_2161	BF49_4299	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	0.901
BF49_2161	BF49_4302	BF49_2161	BF49_4302	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	0.969
BF49_2161	BF49_6203	BF49_2161	BF49_6203	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Transketolase Nterminal section EC 2211.	0.947
BF49_2161	fbp	BF49_2161	BF49_2164	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Fructose16bisphosphatase type I EC 31311; Belongs to the FBPase class 1 family.	0.998
BF49_2161	tal	BF49_2161	BF49_4894	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.	0.994
BF49_2162	BF49_2161	BF49_2162	BF49_2161	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	0.991
BF49_2162	BF49_2274	BF49_2162	BF49_2274	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.	0.927
BF49_2162	BF49_4298	BF49_2162	BF49_4298	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Fructosebisphosphate aldolase class I EC 41213.	0.955
BF49_2162	BF49_4299	BF49_2162	BF49_4299	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	0.969
BF49_2162	BF49_4302	BF49_2162	BF49_4302	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	0.903
BF49_2162	BF49_6203	BF49_2162	BF49_6203	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Transketolase Nterminal section EC 2211.	0.932
BF49_2162	fbp	BF49_2162	BF49_2164	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Fructose16bisphosphatase type I EC 31311; Belongs to the FBPase class 1 family.	0.998
BF49_2162	tal	BF49_2162	BF49_4894	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.	0.999
BF49_2274	BF49_2161	BF49_2274	BF49_2161	Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	0.913
BF49_2274	BF49_2162	BF49_2274	BF49_2162	Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.	Transketolase EC 2211; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	0.927
BF49_2274	BF49_4298	BF49_2274	BF49_4298	Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.	Fructosebisphosphate aldolase class I EC 41213.	0.911
BF49_2274	BF49_4299	BF49_2274	BF49_4299	Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.	Fructosebisphosphate aldolase class II EC 41213; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.	0.913