STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2176FIG00443980 hypothetical protein. (354 aa)    
Predicted Functional Partners:
BF49_1729
Alkylated DNA repair protein AlkB.
   
    0.537
BF49_3149
Hypothetical protein.
   
    0.537
BF49_0755
Biotin carboxylase of acetylCoA carboxylase EC 63414; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
  0.512
BF49_7199
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
    
  0.504
panC
Pantoatebetaalanine ligase EC 6321; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
    
 0.428
BF49_3681
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
    
  0.423
BF49_7095
MethylcrotonylCoA carboxylase biotincontaining subunit EC 6414.
    
  0.423
BF49_2175
Mll1902 protein.
       0.411
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (22%) [HD]