Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2195Cystine ABC transporter periplasmic cystinebinding protein FliY. (272 aa)    
Predicted Functional Partners:
BF49_7046
FIG00442713 hypothetical protein.
 
 0.818
BF49_1113
Glutamate Aspartate transport system permease protein GltJ TC 3A134.
 
 0.770
BF49_3124
Glutamate Aspartate transport system permease protein GltJ TC 3A134.
 
 0.761
BF49_3123
Glutamate Aspartate transport system permease protein GltK TC 3A134.
 
 0.758
BF49_2699
Amino acid ABC transporter permease protein.
 
 0.757
BF49_4327
ABC transporter permease protein.
 
 0.751
BF49_1114
Glutamate Aspartate transport system permease protein GltK TC 3A134.
 
 0.742
BF49_3122
Glutamate Aspartate transport ATPbinding protein GltL TC 3A134.
 
 0.730
BF49_2194
PROBABLE C4DICARBOXYLATETRANSPORT TRANSMEMBRANE PROTEIN DCTA; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
     
 0.698
BF49_7065
ABC transporter ATPbinding protein.
 
 0.694
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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