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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2227Copper binding protein plastocyaninazurin family. (105 aa)    
Predicted Functional Partners:
BF49_2228
FIG01075795 hypothetical protein.
 
     0.946
BF49_2229
RNA polymerase sigmaH factor AlgT; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.727
BF49_0892
Protein tyrosine phosphatase EC 31348.
   
 
 0.581
BF49_0870
Multicopper oxidase.
   
 
 0.563
BF49_2719
Multicopper oxidase.
   
 
 0.563
BF49_4443
Coppercontaining nitrite reductase EC 1721; Belongs to the multicopper oxidase family.
   
 
 0.563
BF49_6613
Multicopper oxidase.
   
 
 0.563
BF49_6651
NADHubiquinone oxidoreductase chain M EC 1653.
    
   0.535
BF49_3145
Hypothetical protein contains weak similarity to NADH dehydrogenase I.
  
     0.515
BF49_1680
Putative transmembrane antisigma factor.
 
     0.458
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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