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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2228FIG01075795 hypothetical protein. (177 aa)    
Predicted Functional Partners:
BF49_2227
Copper binding protein plastocyaninazurin family.
 
     0.946
BF49_2229
RNA polymerase sigmaH factor AlgT; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.824
BF49_1678
Copper binding protein plastocyaninazurin family.
 
     0.548
BF49_1680
Putative transmembrane antisigma factor.
 
     0.548
BF49_3145
Hypothetical protein contains weak similarity to NADH dehydrogenase I.
  
     0.514
BF49_4762
Glycogen debranching enzyme EC 321; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.484
BF49_4882
Glycogen debranching enzyme EC 321; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.484
BF49_4884
Trehalose synthase EC 549916.
   
    0.452
BF49_5970
Hypothetical protein.
  
     0.448
glgA
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.442
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.