STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2258tRNA adenine37N6methyltransferase TrmN6 EC 211223; Belongs to the methyltransferase superfamily. (256 aa)    
Predicted Functional Partners:
BF49_2259
Bsr2531 protein.
       0.853
BF49_2260
Octaprenyl diphosphate synthase EC 25190 Dimethylallyltransferase EC 2511 2E6Efarnesyl diphosphate synthase EC 25110 Geranylgeranyl pyrophosphate synthetase EC 25129; Belongs to the FPP/GGPP synthase family.
       0.698
rsmI
rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.647
BF49_0052
FIG000325 clustered with transcription termination protein NusA.
 
    0.566
rimP
FIG000325 clustered with transcription termination protein NusA; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
 
    0.560
BF49_0048
FIG000325 clustered with transcription termination protein NusA.
 
    0.560
BF49_7365
FIG000325 clustered with transcription termination protein NusA.
 
    0.560
BF49_3017
HAD superfamily protein involved in Nacetylglucosamine catabolism.
 
     0.486
BF49_0104
FIG00442259 hypothetical protein.
  
  
 0.446
BF49_3488
Excinuclease ABC C subunitlike.
  
  
 0.446
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.