STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2266FIG140336 TPR domain protein. (600 aa)    
Predicted Functional Partners:
BF49_0425
Periplasmic septal ring factor with murein hydrolase activity EnvCYibP.
 
 
 
 0.692
ispE
4diphosphocytidyl2CmethylDerythritol kinase EC 271148; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.601
BF49_3272
Methylaccepting chemotaxis protein.
  
   
 0.586
BF49_0558
SAMdependent methyltransferase 2 in cluster with Hydroxyacylglutathione hydrolase EC 3126.
 
     0.578
BF49_1617
FIG00442207 hypothetical protein.
  
     0.572
BF49_2332
FIG003603 membrane protein putative.
  
     0.570
BF49_3271
Methylaccepting chemotaxis protein.
  
   
 0.552
BF49_2267
Electron transfer flavoproteinubiquinone oxidoreductase EC 1551; Accepts electrons from ETF and reduces ubiquinone.
 
     0.548
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
  
 0.547
BF49_2331
FIG139612 Possible conserved membrane protein.
 
   
 0.531
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.