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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2271Lactoylglutathione lyase EC 4415. (151 aa)    
Predicted Functional Partners:
BF49_2272
Radical SAM domain protein.
       0.736
BF49_2273
Hypothetical protein.
       0.701
rnhB
Ribonuclease HII EC 31264; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.609
BF49_2274
Xylulose5phosphate phosphoketolase EC 4129 Fructose6phosphate phosphoketolase EC 41222.
       0.529
ackA
Acetate kinase EC 2721; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.519
BF49_2269
Mll1762 protein.
       0.464
BF49_2390
3demethylubiquinone9 3methyltransferase.
 
     0.409
BF49_2933
Llactate dehydrogenase EC 1123.
    
  0.405
BF49_6732
Glycolate oxidase EC 11315.
    
  0.405
BF49_3368
FIG00443655 hypothetical protein.
   
 
  0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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