Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2277Glycosyl transferase group 2 family protein. (191 aa)    
Predicted Functional Partners:
BF49_1980
Hypothetical protein.
 
 
 0.655
BF49_6587
Probable glycosyl transferase.
  
  
 0.648
BF49_2278
Histone acetyltransferase HPA2 and related acetyltransferases.
     
 0.640
BF49_2981
FIG00441988 hypothetical protein.
  
     0.607
BF49_1617
FIG00442207 hypothetical protein.
  
     0.597
BF49_4088
Hypothetical protein.
   
 0.589
BF49_4395
Predicted integral membrane protein.
  
     0.583
BF49_3082
FIG00741453 hypothetical protein.
 
   
 0.579
BF49_5306
TPR repeat.
  
 0.572
BF49_5103
FIG00441989 hypothetical protein.
  
  
 0.570
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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