Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BF49_0454 | BF49_0455 | BF49_0454 | BF49_0455 | Signal transduction histidine kinase CheA EC 273. | Positive regulator of CheA protein activity CheW. | 0.999 |
BF49_0454 | BF49_0457 | BF49_0454 | BF49_0457 | Signal transduction histidine kinase CheA EC 273. | Chemotaxis protein methyltransferase CheR EC 21180; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.981 |
BF49_0454 | BF49_2286 | BF49_0454 | BF49_2286 | Signal transduction histidine kinase CheA EC 273. | Aerotaxis sensor receptor protein. | 0.962 |
BF49_0454 | BF49_2739 | BF49_0454 | BF49_2739 | Signal transduction histidine kinase CheA EC 273. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.968 |
BF49_0454 | BF49_2742 | BF49_0454 | BF49_2742 | Signal transduction histidine kinase CheA EC 273. | Positive regulator of CheA protein activity CheW. | 0.998 |
BF49_0454 | BF49_2743 | BF49_0454 | BF49_2743 | Signal transduction histidine kinase CheA EC 273. | Signal transduction histidine kinase CheA EC 273. | 0.988 |
BF49_0454 | BF49_3244 | BF49_0454 | BF49_3244 | Signal transduction histidine kinase CheA EC 273. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.987 |
BF49_0454 | BF49_6380 | BF49_0454 | BF49_6380 | Signal transduction histidine kinase CheA EC 273. | Proteinglutamate methylesterase. | 0.997 |
BF49_0454 | BF49_6381 | BF49_0454 | BF49_6381 | Signal transduction histidine kinase CheA EC 273. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.998 |
BF49_0454 | cheB | BF49_0454 | BF49_2740 | Signal transduction histidine kinase CheA EC 273. | Chemotaxis response regulator proteinglutamate methylesterase CheB EC 31161; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
BF49_0455 | BF49_0454 | BF49_0455 | BF49_0454 | Positive regulator of CheA protein activity CheW. | Signal transduction histidine kinase CheA EC 273. | 0.999 |
BF49_0455 | BF49_0457 | BF49_0455 | BF49_0457 | Positive regulator of CheA protein activity CheW. | Chemotaxis protein methyltransferase CheR EC 21180; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.978 |
BF49_0455 | BF49_2286 | BF49_0455 | BF49_2286 | Positive regulator of CheA protein activity CheW. | Aerotaxis sensor receptor protein. | 0.908 |
BF49_0455 | BF49_2739 | BF49_0455 | BF49_2739 | Positive regulator of CheA protein activity CheW. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.959 |
BF49_0455 | BF49_2742 | BF49_0455 | BF49_2742 | Positive regulator of CheA protein activity CheW. | Positive regulator of CheA protein activity CheW. | 0.900 |
BF49_0455 | BF49_2743 | BF49_0455 | BF49_2743 | Positive regulator of CheA protein activity CheW. | Signal transduction histidine kinase CheA EC 273. | 0.998 |
BF49_0455 | BF49_3244 | BF49_0455 | BF49_3244 | Positive regulator of CheA protein activity CheW. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.936 |
BF49_0455 | BF49_6380 | BF49_0455 | BF49_6380 | Positive regulator of CheA protein activity CheW. | Proteinglutamate methylesterase. | 0.975 |
BF49_0455 | BF49_6381 | BF49_0455 | BF49_6381 | Positive regulator of CheA protein activity CheW. | Chemotaxis protein methyltransferase CheR EC 21180. | 0.981 |
BF49_0455 | cheB | BF49_0455 | BF49_2740 | Positive regulator of CheA protein activity CheW. | Chemotaxis response regulator proteinglutamate methylesterase CheB EC 31161; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.986 |
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