Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2290Salicylate hydroxylase EC 114131. (428 aa)    
Predicted Functional Partners:
BF49_5554
2polyprenyl6methoxyphenol hydroxylase and related FADdependent oxidoreductases.
  
  
 
0.906
BF49_1219
Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
   
    0.579
BF49_4776
Highaffinity branchedchain amino acid transport system permease protein LivH TC 3A141 Branchedchain amino acid transport system permease protein LivM TC 3A141; Belongs to the binding-protein-dependent transport system permease family.
   
    0.579
BF49_2289
Glutathione Stransferase EC 25118; Belongs to the GST superfamily.
     
 0.556
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
   
 
 0.553
BF49_3520
Gentisate 12dioxygenase EC 113114.
 
  
 0.529
BF49_0580
Putative nitrile hydratase regulator clustered with urea transport.
   
    0.508
BF49_1220
Branchedchain amino acidbinding protein.
   
    0.508
BF49_4226
Urea ABC transporter substrate binding protein UrtA.
   
    0.508
BF49_7222
Urea ABC transporter substrate binding protein UrtA.
   
    0.508
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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