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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2294Periplasmic thioldisulfide interchange protein DsbA. (218 aa)    
Predicted Functional Partners:
BF49_3320
Periplasmic thioldisulfide oxidoreductase DsbB required for DsbA reoxidation.
 
 
 0.769
BF49_0751
Proteindisulfide isomerase.
 
   
 0.709
BF49_2293
Znribboncontaining possibly RNAbinding protein and truncated derivatives.
 
     0.703
smc
Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
  
 0.535
BF49_5053
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.518
BF49_4268
THIOdisulfide Interchange Protein.
 
   
 0.481
polA
DNA polymerase I EC 2777; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.471
BF49_0386
Cytochrome ctype biogenesis protein CcmGDsbE thioldisulfide oxidoreductase.
 
 
 0.455
BF49_2292
AGspecific adenine glycosylase EC 322; Adenine glycosylase active on G-A mispairs.
       0.443
BF49_0087
FIG061771 ATPdependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily.
 
     0.436
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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