Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2305Dienelactone hydrolase family. (224 aa)    
Predicted Functional Partners:
BF49_1390
Alcohol dehydrogenase EC 1111.
  
 
 0.964
BF49_7192
Alcohol dehydrogenase EC 1111.
  
 
 0.957
BF49_1393
Catechol 12dioxygenase EC 113111.
   
 
 0.930
BF49_1887
Catechol 12dioxygenase EC 113111.
   
 
 0.930
BF49_5564
FIG00440890 hypothetical protein.
  
  
 0.591
BF49_5205
Bll6462 protein.
 
     0.571
BF49_2306
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
     
 0.545
BF49_2304
Hypothetical protein.
       0.508
BF49_2307
Ubiquinolcytochrome C reductase ironsulfur subunit EC 11022; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
    0.409
BF49_3298
Flavincontaining monooxygenase.
  
    0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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