Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BF49_2338Methyltransferase type 11. (228 aa)    
Predicted Functional Partners:
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.694
BF49_6971
Hypothetical protein.
   
 0.673
BF49_2337
Hypothetical protein.
       0.668
BF49_2339
PhnO protein.
       0.655
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
    
 0.646
BF49_2340
Glycosyltransferase.
  
  
 0.564
cysC
Sulfate adenylyltransferase subunit 1 EC 2774 Adenylylsulfate kinase EC 27125; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
 
 0.537
BF49_2642
Mobile element protein.
  
     0.532
BF49_2466
Mobile element protein.
  
     0.521
BF49_2641
Mobile element protein.
  
     0.521
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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