STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_2351Hypothetical protein. (202 aa)    
Predicted Functional Partners:
BF49_4412
TPR repeat precursor.
 
     0.776
BF49_0424
Carboxylterminal protease EC 3421102; Belongs to the peptidase S41A family.
    
 
 0.690
BF49_6733
Carboxylterminal protease family protein; Belongs to the peptidase S41A family.
    
 
 0.690
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
   
    0.591
BF49_3753
Adenylate cyclase EC 4611.
  
     0.507
htpX-2
Peptidase M48 Ste24p; Belongs to the peptidase M48B family.
       0.475
BF49_3957
Kinesin light chain.
 
     0.446
BF49_2353
Hypothetical protein.
 
     0.432
BF49_2354
Hypothetical protein.
 
     0.415
BF49_3355
FIG00444176 hypothetical protein.
  
     0.411
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.